# Vault Systematic Audit — Report **Date:** March 2025 **Scope:** Phases 1–6 per Vault Systematic Audit Plan. `zenodo_submission/` excluded. --- ## Phase 1: Deprecated content — COMPLETED ### 1.1 Scripts archived Moved to `archive/` with README: | Script | Superseded By | |:---|:---| | rst_weinberg_derivation.py | rst_connes_koide.py | | rst_dstar_gauge.py | rst_self_consistency.py | | rst_n_scaling.py | rst_n_shannon.py | | rst_closure_audit.py | rst_final_closure.py | | rst_final_closure.py | rst_complete_chain.py | | rst_perturbations.py | rst_generalized_aether.py | | rst_param_audit.py | rst_action_complete.py | ### 1.2 Document references - How to read, Overview: Entry paper and theory paper links retained; derivation chain entry point added. - **Spectrum of Relational Topologies:** Updated `rst_param_audit.py` → `rst_action_complete.py`. ### 1.3 Outdated claims fixed - **d_B:** Standardised on 1.22 (backbone dimension) in Derivation Chain Overview, Applications Roadmap, Micro-Graph Generator, Sovereign Chain. Clarified 1.86 as fractal dimension of incipient cluster. - **Implementation status:** Micro-Graph Generator script updated from rst_genesis.py to rst_axiom_pure.py (primary) with ledger as alternative. - **α_s:** Confirmed "Derived" status in Derivation Chain §4 and §5. - **9 → 10 SM constants:** Updated vault docs to include α_s; zenodo unchanged. --- ## Phase 2: Scripts audit — COMPLETED ### 2.1–2.5 Architecture and docs - **rst_master_visualizer.py:** Primary Cosmic Visualizer; extended with `--scale cosmos|mineral|atomic|quantum`. - **Micro-Graph Generator:** rst_axiom_pure.py documented as canonical; rst_graph_rule_visualize.py marked archived. - **Implementation status:** Aligned with current scripts. - **Script–doc consistency:** Code notes updated for Cosmic Visualizer and Micro-Graph Generator. ### 2.6 Unified Pipeline **Archived (Phase 2.6):** | Script | Rationale | |:---|:---| | rst_visualizer.py | Redundant: rst_master_visualizer.py --scale cosmos | | rst_galaxy_visualizer.py | Optical coarse-graining; not strict topology | | rst_coarse_grainer.py | A5 violation: quotient_graph collapses distance | | rst_ladder_visualizer.py | Merged into rst_master_visualizer.py --scale | | rst_graph_rule_visualize.py | Ledger logic; rst_axiom_pure canonical | **Track 1 (Dimensional Ladder):** rst_export_cosmos.py → rst_master_visualizer.py --scale **Track 2 (Matter):** rst_nuclear_fusion.py, rst_animate_chemistry.py, rst_nucleon_ground_state.py **Static proofs:** rst_sovereign_chain_geometry.py, rst_binding_energy_curve.py --- ## Phase 3: Citations — LIGHT SCAN - PDG, Landauer, Connes, Koide, Mitchell, Montgomery cited in Sovereign Chain, Lexicon, RST Baseline. - Cross-document references between Derivation Chain, Sovereign Chain, RST Baseline checked. - **Deferred:** Full scan of `cite`, `@`, `(Author et al.)` patterns; recommend manual pass. --- ## Phase 4: Atomicity — COMPLETED ### 4.1 Canonical sources Added **Canonical concept sources** to [[Lexicon and Mapping]]: | Concept | Canonical Source | |:---|:---| | μ(η,n) / fidelity | Fidelity Derivation, rst_engine/core.py | | Resource Triangle | Fidelity Derivation | | a₀ = cH/(2π) | Noise Floor, RST | | d* = 9 + θ_W | Sovereign Chain Step 2 | | α_s = 1/(8 + θ_W) | Sovereign Chain Step 2b | | d_B = 1.22 | Sovereign Chain, Backbone Dimension | ### 4.2–4.3 - Overlapping application notes: Cosmic Visualizer Code at further-apps root and (RST) subfolder—both updated to reference master visualizer. - VAULT_INDEX vs Implementation status: both updated; full reconciliation deferred. --- ## Phase 5: Internal links — PARTIAL - **Entry paper:** `[[Entry paper — RRT, RST, and applications]]` resolves to `zenodo_submission/Entry paper — RRT, RST, and applications.md`. - **Per-axiom pages:** Created Axiom A1–A5; RST Baseline and How to read link correctly. - **Deferred:** Full extraction of all `[[...]]` links and resolution check; orphan detection; image embed validation. Recommend Obsidian's "Find broken links" or equivalent. --- ## Phase 6: Derivation chain — COMPLETED ### 6.1–6.3 - Path: RRT (A1–A5) → Fidelity → Pure Axiom → Sovereign Chain → 10 SM quantities. - Derivation Chain Overview, Sovereign Chain, RST Baseline kept consistent. - How to read: Added derivation chain and per-axiom entry points. ### 6.4 Per-axiom pages Created: - [[Axiom A1 - Bandwidth]] - [[Axiom A2 - Workload]] - [[Axiom A3 - Environment]] - [[Axiom A4 - Events]] - [[Axiom A5 - Distance]] RST Baseline links to these pages; axioms table preserved with links. ### Overview - Entry points added: axioms → derivation chain → applications. - Structure table and related docs updated. --- ## Deliverables 1. **Audit report:** This document. 2. **Deprecated scripts list:** `archive/README.md`. 3. **Broken links:** Partial scan; full audit deferred. 4. **Duplication matrix:** Canonical sources in Lexicon. 5. **Derivation chain diagram:** Existing mermaid in Derivation Chain Overview retained; entry points clarified. --- ## Recommended follow-ups 1. Full Phase 5: Extract and validate all `[[...]]` links. 2. Phase 3: Systematic citation consistency check. 3. Phase 4.3: Single master script registry (VAULT_INDEX vs Implementation status). 4. Verify no `run_all_*` scripts reference archived visualizers.